27 datasets found

Sup35 protofibril (20x2) growth via elongation by addition of monomers at the ends with 2 free peptides studied by MD with GROMOS 54A7 in GROMACS (1 replicate).

Sup35 protofibril (20x2) growth via elongation by addition of monomers at the ends with 2+3 free peptides studied by MD with GROMOS 54A7 in GROMACS (1 replicate).

Sup35 protofibril (20x2) growth via elongation by addition of monomers at the ends with 2+3+7 free peptides studied by MD with GROMOS 54A7 in GROMACS (1 replicate).

Sup35 protofibril (20x2) growth via elongation by addition of monomers at the ends with 5 free peptides studied by MD with GROMOS 54A7 in GROMACS (1 replicate).

Beta peptide 3 with GROMOS 54A8 in GROMOS (replicate 1 of 1).

Beta peptide 2 with GROMOS 54A8 in GROMOS (replicate 1 of 1).

Beta peptide 1 with GROMOS 54A8 in GROMOS (replicate 1 of 1).

Endothelial monocyte-activating polypeptide II with GROMOS 54A8 in GROMOS (replicate 2 of 1). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 1FL0, URL:...

Beta peptide 3 with GROMOS 54A7 in GROMOS (replicate 1 of 1).

Beta peptide 2 with GROMOS 54A7 in GROMOS (replicate 1 of 1).

Beta peptide 1 with GROMOS 54A7 in GROMOS (replicate 1 of 1).

Endothelial monocyte-activating polypeptide II with GROMOS 54A7 in GROMOS (replicate 2 of 1). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 1FL0, URL:...

Chitin binding domain of chitinase protein with GROMOS REDO in AMBER (replicate 1 of 1). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 2CWR, URL:...

Villin headpiece protein with GROMOS REDO in AMBER (replicate 1 of 1). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 1YU5, URL:...

Phospholipase A2 protein with GROMOS 54A7 in AMBER (replicate 1 of 1). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 1LWB, URL:...

Phospholipid A2 protein with GROMOS HISA in AMBER (replicate 1 of 1). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 1FAZ, URL:...

Alpha-helical peptide YGG with GROMOS 54A7 in AMBER (replicate 1 of 1).

Alpha-helical peptide YGA with GROMOS 54A7 in AMBER (replicate 1 of 1).

Alpha-helical peptide AP with GROMOS 54A7 in AMBER (replicate 1 of 1).

Beta peptide 3 with GROMOS 53A6 in GROMOS (replicate 1 of 1).